Protein ZmOrphan94 | |
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Information | |
Orphans Name: | ZmOrphan94 |
Species: | Maize |
Orphans Family: | Orphans |
Gene Name(Synonym): | |
Uniprot ID: | C0P6E9 |
Subgenome: | 1 |
ZmOrphan94 is a protein in the Orphans family.
Overview of domains present in v5 transcripts | |
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PF06203 | |
Zm00001eb297870_T001 | |
Zm00001eb297870_T002 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d039222 | DAPseq | sequence | fimo | position | |
Zm00001d039222 | DAPseq | sequence | fimo | position | |
Zm00001d039222 | ChIPseq | sequence | fimo | position | |
Zm00001d039222 | PChIPseq | sequence | fimo | position |
MYADALASSQPPPPPFLSMGVMDHEAYAAVPSMVSEYDLGGEGDLFKAPQVIIQEEALLSLDPVAAACSMMNQTIKDAGI
QNDALLSEVLYECEKELMEKSAIEETISELMDVKIPMLQAEQLPAMENEKRSIPECSLQKSVSSGCLNSADWMNGAVRPN
FLDFQGLDFEAAFGLRRAYSEGDIQNLGANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALAD
SQPRVRGRFAKIEECDLLLLNSST
MYADALASSQPPPPPFLSMGVMDHEAYAAVPSMVSEYDLGGEGDLFKAPQVIIQEEALLSLDPVAAACSMMNQTIKDAGI
QNDALLSEVLYECEKELMEKSAIEETISELMDVKIPMLQAEQLPAMENEKRSIPECSLQKSVSSGCLNSADWMNGAVRPN
FLDFQGLDFEAAFGLRRAYSEGDIQNLGANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALAD
SQPRVRGRFAKIEECDLLLLNSST
MYADALASSQPPPPPFLSMGVMDHEAYAAVPSMVSEYDLGGEGDLFKAPQVIIQEEALLSLDPVAAACSMMNQTIKDAGI
QNDALLSEVLYECEKELMEKSAIEETISELMDVKIPMLQAEQLPAMENEKRSIPECSLQKSVSSGCLNSADWMNGAVRPN
FLDFQGLDFEAAFGLRRAYSEGDIQNLGANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALAD
SQPRVRGRFAKIEECDLLLLNSST
MYADALASSQPPPPPFLSMGVMDHEAYAAVPSMVSEYDLGGEGDLFKAPQVIIQEEALLSLDPVAAACSMMNQTIKDAGI
QNDALLSEVLYECEKELMEKSAIEETISELMDVKIPMLQAEQLPAMENEKRSIPECSLQKSVSSGCLNSADWMNGAVRPN
FLDFQGLDFEAAFGLRRAYSEGDIQNLGANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALAD
SQPRVRGRFAKIEECDLLLLNSST
MYADALASSQPPPPPFLSMGVMDHEAYAAVPSMVSEYDLGGEGDLFKAPQVIIQEEALLSLDPVAAACSMMNQTIKDAGI
QNDALLSEVLYECEKELMEKSAIEETISELMDVKIPMLQAEQLPAMENEKRSIPECSLQKSVSSGCLNSADWMNGAVRPN
FLDFQGLDFEAAFGLRRAYSEGDIQNLGANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALAD
SQPRVRGRFAKIEECDLLLLNSST
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF06203 |
|
Hover here to show all domains |
CGCACCTCAGTGGTTTCGATAAACC...
CGCACCTCAGTGGTTTCGATAAACCGACCGGTTTACTGCACCGGTTTTGTAAACCATGGTTCCACCATGCTTTTGTCCCATTCTCCCTCCACTTCCTTTTTGTTTGTCCTTTTTCGTTTGTTGCCTTGTTGGTTTCGTTTCGTTCGTCTTCCCCCCCGTGCTGCGTGCGCTGCTCGCCTTCCCGTGCTATTGCGTCTGCCTATAAAGCGGCCGGACGGCCATAAACCTCAGCCGGCCGGCCTCCTCGCTCTCGGACCGGAGCTCGGCCTCTGCTCTCCTCCCTCCGATCTGCTCTACTCGATCTGTTGGTGTTGGCCGTGCGCCGGTGCCCGTACCATCGTCAGTGGCAGTGCACCTTCCTCCGACTCCAGCTCAAACTCTCTTCAACGGTAGACGCTAGCGCCCCCCTCCCCTGTCTGTGACGGCTACAGGCCTCCTCCTCCCGCTACAACGGTGCCCCCTAGCGCTGCTACAGTGCTAGCGGCTGCTGGGTGCAGACGCTACATCAAGGGGTACCACAAGGGCTCCTCTTGCCTCGATTTATGTGTACAAAAATATTTATTAGTTGTGAAAAAATTGATAATAGATGATGAATATGTATGGAAAATAGTATTTTATGATTATAGTGGGGTATAGGGAAAGGATTTAGGGAGAACCGCTGTACAGGATGGAGATATAGGGGGAAGAGAACGCTGACGTGACACGTGTGTGGGATATAGGGGGAAAAATTTAGGGGTAACCAACCGCTGAAGACAGTCTCATCAGTGGCCCTGCGCCGCCAGCCCCACTCCTCGCCACTCGCAGTCGCAGTAGAGTGGGCGCTGGACTGTAGCCAGCCGAGCCCGCTGCCGCAAAAAACACAGACACCAACCAACCGCCTCTCTCTCTCTCTCTCTCTGTCTCTCCCGCTGCTGAGATCTCATCTGACTGCCCAGAGGGAGATTGAGACTGCGGAATTGAAGCAGCTACCCAACATGTACGCCGACGCCCTCGCCTCCTCGCAGCCCCCGCCGCCACCCTTCCTCTCCATGGGCGTCATGGACCACGAAGCCTACGCCGCCGTGCCATCCATGGTATCAGAATATGACCTCGGAGGAGAAGGGGACCTGTTCAAAGCTCCACAAGTCATCATCCAAGAAGAAGCGCTGCTCAGCCTTGATCCTGTCGCAGCTGCCTGCTCAATGATGAATCAAACTATTAAGGATGCAGGCATCCAGAACGACGCTCTCCTGAGTGAAGTGTTGTATGAGTGCGAGAAGGAACTCATGGAAAAGTCTGCAATCGAAGAGACAATTTCTGAACTTATGGATGTTAAGATCCCTATGCTGCAAGCTGAACAACTCCCGGCCATGGAGAATGAGAAGCGTTCCATTCCTGAATGCTCGCTCCAGAAAAGTGTTAGTTCTGGATGCCTCAACTCGGCAGATTGGATGAATGGAGCTGTCAGGCCAAACTTTCTAGACTTCCAAGGGCTGGACTTTGAGGCAGCGTTTGGGCTGAGGAGAGCTTACAGTGAAGGAGACATTCAGAACCTTGGAGCCAACACGCCTCGACCAGCAGCAAATGTTTGTGTGACCATCAGTGACCTCAAGACCGAAGAAAGGAAGCAAAAGCTTTCCAGGTATAGAAAAAAGAAGATCAAGCGGAACTTTGGCAGGAAGATTAAGTATGCTTGTAGGAAGGCTCTGGCAGACAGCCAGCCAAGGGTGAGAGGGAGATTTGCCAAGATCGAAGAATGCGACCTGCTGCTGCTGAATTCAAGCACTTAGATGGAGGTTCAGTCGATCATTCAGCTGTTCAAAATCCACCTCCTCTACCCAGCCGTTTTGGTGCGAGCCGAGGGAGTTAAGAGCTGAAAGTGGTGGTAGTCTAGTTGGTTAGCTAGCCCCTGTACAAAGGCTTGAATGAAGATGGCAATAAAACTCAGCTCTCCCCTCTGCTTGCTTGGCACTGCACTCCTTGTGCCTTACTGAAAACAAGAGCAAAAACAGACTCATGAAGATTAACAAATTTCACGGTGTATTCCTTCCTTTCCTTGTGCCTTACTGCACCACAATCAATCCAACTCAAAAGTAATAGGTGACGGTAGCTACTTTATTACATCCTGCCTTGGTCTGTCGGCAATTATGTGAAAACTGAAAAGAAAAAAGCAAACCTCAAGAGATTTAGTCGCTGGTTAATTCACCCCATAGACCCACTTCTCCGCATTGCTGGTATAAGAGACCAGCTCCTTGGGTTCAAACCACAAGGCGATCTCATCCTTTGCTGTCTCCG
MYADALASSQPPPPPFLSMGVMDHEAYAAVPSMVSEYDLGGEGDLFKAPQVIIQEEALLSLDPVAAACSMMNQTIKDAGI
QNDALLSEVLYECEKELMEKSAIEETISELMDVKIPMLQAEQLPAMENEKRSIPECSLQKSVSSGCLNSADWMNGAVRPN
FLDFQGLDFEAAFGLRRAYSEGDIQNLGANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALAD
SQPRVRGRFAKIEECDLLLLNSST
AGCCCGCTGCCGCAAAAAACACAGA...
AGCCCGCTGCCGCAAAAAACACAGACACCAACCAACCGCCTCTCTCTCTCTCTCTCTCTGTCTCTCCCGCTGCTGAGATCTCATCTGACTGCCCAGAGGGAGATTGAGACTGCGGAATTGAAGCAGCTACCCAACATGTACGCCGACGCCCTCGCCTCCTCGCAGCCCCCGCCGCCACCCTTCCTCTCCATGGGCGTCATGGACCACGAAGCCTACGCCGCCGTGCCATCCATGGTATCAGAATATGACCTCGGAGGAGAAGGGGACCTGTTCAAAGCTCCACAAGTCATCATCCAAGAAGAAGCGCTGCTCAGCCTTGATCCTGTCGCAGCTGCCTGCTCAATGATGAATCAAACTATTAAGGATGCAGGCATCCAGAACGACGCTCTCCTGAGTGAAGTGTTGTATGAGTGCGAGAAGGAACTCATGGAAAAGTCTGCAATCGAAGAGACAATTTCTGAACTTATGGATGTTAAGATCCCTATGCTGCAAGCTGAACAACTCCCGGCCATGGAGAATGAGAAGCGTTCCATTCCTGAATGCTCGCTCCAGAAAAGTGTTAGTTCTGGATGCCTCAACTCGGCAGATTGGATGAATGGAGCTGTCAGGCCAAACTTTCTAGACTTCCAAGGGCTGGACTTTGAGGCAGCGTTTGGGCTGAGGAGAGCTTACAGTGAAGGAGACATTCAGAACCTTGGAGCCAACACGCCTCGACCAGCAGCAAATGTTTGTGTGACCATCAGTGACCTCAAGACCGAAGAAAGGAAGCAAAAGCTTTCCAGGTATAGAAAAAAGAAGATCAAGCGGAACTTTGGCAGGAAGATTAAGTATGCTTGTAGGAAGGCTCTGGCAGACAGCCAGCCAAGGGTGAGAGGGAGATTTGCCAAGATCGAAGAATGCGACCTGCTGCTGCTGAATTCAAGCACTTAGATGGAGGTTCAGTCGATCATTCAGCTGTTCAAAATCCACCTCCTCTACCCAGCCGTTTTGGTGCGAGCCGAGGGAGTTAAGAGCTGAAAGTGGTGGTAGTCTAGTTGGTTAGCTAGCCCCTGTACAAAGGCTTGAATGAAGATGGCAATAAAACTCAGCTCTCCCCTCTGCTTGCTTGGCACTGCACTCCTTGTGCCTTACTGAAAACAAGAGCAAAAACAGACTCATGAAGATTAACAAATTTCACGGTGTATTCCTTCCTTTCCTTGTGCCTTACTGCACCACAATCAATCCAACTCAAAAGTAATAGGTGACGGTAGCTACTTTATTACATCCTGCCTTGGTCTGTCGGCAATTATGTGAAAACTGAAAAGAAAAAAGCAAACCTCAAGAGATTTAGTCGCTGGTTAATTCACCCCATAGACCCACTTCTCCGCATTGCTGGTATAAGAGACCAGCTCCTTGGGTTCAAACCACAAGGCGATCTCATCCTTTGCTGTCTCCGGGCCATCACTTCCATGAATGATGTTTCTGGTGTGTTCATAACAAGC
MYADALASSQPPPPPFLSMGVMDHEAYAAVPSMVSEYDLGGEGDLFKAPQVIIQEEALLSLDPVAAACSMMNQTIKDAGI
QNDALLSEVLYECEKELMEKSAIEETISELMDVKIPMLQAEQLPAMENEKRSIPECSLQKSVSSGCLNSADWMNGAVRPN
FLDFQGLDFEAAFGLRRAYSEGDIQNLGANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALAD
SQPRVRGRFAKIEECDLLLLNSST
CCAACCGCCTCTCTCTCTCTCTCTC...
CCAACCGCCTCTCTCTCTCTCTCTCTCTGTCTCTCCCGCTGCTGAGATCTCATCTGACTGCCCAGAGGGAGATTGAGACTGCGGAATTGAAGCAGCTACCCAACATGTACGCCGACGCCCTCGCCTCCTCGCAGCCCCCGCCGCCACCCTTCCTCTCCATGGGCGTCATGGACCACGAAGCCTACGCCGCCGTGCCATCCATGGTATCAGAATATGACCTCGGAGGAGAAGGGGACCTGTTCAAAGCTCCACAAGTCATCATCCAAGAAGAAGCGCTGCTCAGCCTTGATCCTGTCGCAGCTGCCTGCTCAATGATGAATCAAACTATTAAGGATGCAGGCATCCAGAACGACGCTCTCCTGAGTGAAGTGTTGTATGAGTGCGAGAAGGAACTCATGGAAAAGTCTGCAATCGAAGAGACAATTTCTGAACTTATGGATGTTAAGATCCCTATGCTGCAAGCTGAACAACTCCCGGCCATGGAGAATGAGAAGCGTTCCATTCCTGAATGCTCGCTCCAGAAAAGTGTTAGTTCTGGATGCCTCAACTCGGCAGATTGGATGAATGGAGCTGTCAGGCCAAACTTTCTAGACTTCCAAGGGCTGGACTTTGAGGCAGCGTTTGGGCTGAGGAGAGCTTACAGTGAAGGAGACATTCAGAACCTTGGAGCCAACACGCCTCGACCAGCAGCAAATGTTTGTGTGACCATCAGTGACCTCAAGACCGAAGAAAGGAAGCAAAAGCTTTCCAGGTATAGAAAAAAGAAGATCAAGCGGAACTTTGGCAGGAAGATTAAGTATGCTTGTAGGAAGGCTCTGGCAGACAGCCAGCCAAGGGTGAGAGGGAGATTTGCCAAGATCGAAGAATGCGACCTGCTGCTGCTGAATTCAAGCACTTAGATGGAGGTTCAGTCGATCATTCAGCTGTTCAAAATCCACCTCCTCTACCCAGCCGTTTTGGTGCGAGCCGAGGGAGTTAAGAGCTGAAAGTGGTGGTAGTCTAGTTGGTTAGCTAGCCCCTGTACAAAGGCTTGAATGAAGATGGCAATAAAACTCAGCTCTCCCCTCTGCTTGCTTGGCACTGCACTCCTTGTGCCTTACTGAAAACAAGAGCAAAAACAGACTCATGAAGATTAACAAATTTCACGGTGTATTCCTTC
MVSEYDLGGEGDLFKAPQVIIQEEALLSLDPVAAACSMMNQTIKDAGIQNDALLSEVLYECEKELMEKSAIEETISELMD
VKIPMLQAEQLPAMENEKRSIPECSLQKSVSSGCLNSADWMNGAVRPNFLDFQGLDFEAAFGLRRAYSEGDIQNLGANTP
RPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKIEECDLLLLNSST
CGCACCTCAGTGGTTTCGATAAACC...
CGCACCTCAGTGGTTTCGATAAACCGACCGGTTTACTGCACCGGTTTTGTAAACCATGGTTCCACCATGCTTTTGTCCCATTCTCCCTCCACTTCCTTTTTGTTTGTCCTTTTTCGTTTGTTGCCTTGTTGGTTTCGTTTCGTTCGTCTTCCCCCCCGTGCTGCGTGCGCTGCTCGCCTTCCCGTGCTATTGCGTCTGCCTATAAAGCGGCCGGACGGCCATAAACCTCAGCCGGCCGGCCTCCTCGCTCTCGGACCGGAGCTCGGCCTCTGCTCTCCTCCCTCCGATCTGCTCTACTCGATCTGTTGGTGTTGGCCGTGCGCCGGTGCCCGTACCATCGTCAGTGGCAGTGCACCTTCCTCCGACTCCAGCTCAAACTCTCTTCAACGCCATCCATGGTATCAGAATATGACCTCGGAGGAGAAGGGGACCTGTTCAAAGCTCCACAAGTCATCATCCAAGAAGAAGCGCTGCTCAGCCTTGATCCTGTCGCAGCTGCCTGCTCAATGATGAATCAAACTATTAAGGATGCAGGCATCCAGAACGACGCTCTCCTGAGTGAAGTGTTGTATGAGTGCGAGAAGGAACTCATGGAAAAGTCTGCAATCGAAGAGACAATTTCTGAACTTATGGATGTTAAGATCCCTATGCTGCAAGCTGAACAACTCCCGGCCATGGAGAATGAGAAGCGTTCCATTCCTGAATGCTCGCTCCAGAAAAGTGTTAGTTCTGGATGCCTCAACTCGGCAGATTGGATGAATGGAGCTGTCAGGCCAAACTTTCTAGACTTCCAAGGGCTGGACTTTGAGGCAGCGTTTGGGCTGAGGAGAGCTTACAGTGAAGGAGACATTCAGAACCTTGGAGCCAACACGCCTCGACCAGCAGCAAATGTTTGTGTGACCATCAGTGACCTCAAGACCGAAGAAAGGAAGCAAAAGCTTTCCAGGTATAGAAAAAAGAAGATCAAGCGGAACTTTGGCAGGAAGATTAAGTATGCTTGTAGGAAGGCTCTGGCAGACAGCCAGCCAAGGGTGAGAGGGAGATTTGCCAAGATCGAAGAATGCGACCTGCTGCTGCTGAATTCAAGCACTTAGATGGAGGTTCAGTCGATCATTCAGCTGTTCAAAATCCACCTCCTCTACCCAGCCGTTTTGGTGCGAGCCGAGGGAGTTAAGAGCTGAAAGTGGTGGTAGTCTAGTTGGTTAGCTAGCCCCTGTACAAAGGCTTGAATGAAGATGGCAATAAAACTCAGCTCTCCCCTCTGCTTGCTTGGCACTGCACTCCTTGTGCCTTACTGAAAACAAGAGCAAAAACAGACTCATGAAGATTAACAAATTTCACGGTGTATTCCTTCCTTTCCTTGTGCCTTACTGCACCACAATCAATCCAACTCAAAAGTAATAGGTGACGGTAGCTACTTTATTACATCCTGCCTTGGTCTGTCGGCAATTATGTGAAAACTGAAAAGAAAAAAGCA
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